Prison Break: Episode 13 "The Art Of The Deal" - Lates INFO from The_Man

Okay I'll shed a little more light on this hopefully....here is the scene where Michael receives something from the great beyond.....

EXT. ALLEY BEHIND HOSPITAL - DAY 11 54
As Michael and Lincoln pace in the alley, the hospital door opens. LJ emerges.
Lincoln and Michael turn to him, anxious to hear the news.

LJ
She's gonna be okay.

Lincoln and Michael breathe a sigh of relief.

LJ (CONT'D)
Uncle Mike? I wanted to wait until we were safe to do this...
Michael turns around. LJ takes something from his pocket.

LJ (CONT'D)
I found this in the house. In the room where Sara and I were held.

LJ opens his hand... it's the origami rose Michael gave to Sara.

LJ (CONT'D)
I thought you'd want to have it.

Michael is overcome with emotion... LJ and Lincoln step away, give Michael a moment.

it would be during this scene that a flashback of Sara would most likely take place. it isn't in the script because it could have been decided on later.

(source: The Man)